Example: A coarse-grained multicomponent vesicle with protein inclusions (cutaway view)
Coordinates generated by PACKMOL
(and read into moltemplate using the -xyz argument)
This is an example of a mixture of different coarse-grained biomolecule models (published in different papers), mixed together using MOLTEMPLATE and PACKMOL to build a large coarse-grained vesicle.
Some minor adjustments to the force-field were necessary after mixing the three types of coarse-grained molecules together. (Further adjustment may be necessary for realistic results.
This example can be downloaded
3-D graphics generated by